Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdt1Q8R4E9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 App-207ENSMUST00000227737 2827 ntBASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.13■□□□□ 0.01
Cdt1Q8R4E9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gm12260-201ENSMUST00000122447 411 ntBASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gm7063-201ENSMUST00000186840 981 ntBASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Gm2756-201ENSMUST00000195851 400 ntBASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Psmb5-202ENSMUST00000227257 622 ntBASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdt1Q8R4E9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms