Protein–RNA interactions for Protein: Q8K1J5

Sde2, Replication stress response regulator SDE2, mousemouse

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sde2Q8K1J5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.83■□□□□ 0.6
Sde2Q8K1J5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sde2Q8K1J5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sde2Q8K1J5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Rprl2-201ENSMUST00000157150 290 ntBASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Mir6990-201ENSMUST00000183724 91 ntBASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sde2Q8K1J5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Rpph1-201ENSMUST00000175096 319 ntBASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sde2Q8K1J5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm9385-201ENSMUST00000117563 472 ntBASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm18889-201ENSMUST00000174284 929 ntBASIC18.79■□□□□ 0.6
Sde2Q8K1J5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.79■□□□□ 0.6
Sde2Q8K1J5 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms