Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfwd3Q8CIK8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Gm7153-201ENSMUST00000117092 455 ntBASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Gm27459-201ENSMUST00000184860 107 ntBASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfwd3Q8CIK8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfwd3Q8CIK8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Gm24589-201ENSMUST00000116692 94 ntBASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfwd3Q8CIK8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Sybu-209ENSMUST00000228639 4113 ntBASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Gm12497-201ENSMUST00000138778 237 ntBASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfwd3Q8CIK8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms