Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Zswim3Q8CFL8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zswim3Q8CFL8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Zswim3Q8CFL8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.07■□□□□ 0.32
Zswim3Q8CFL8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Zswim3Q8CFL8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Mir7684-201ENSMUST00000183858 60 ntBASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Gm27989-201ENSMUST00000184721 107 ntBASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zswim3Q8CFL8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms