Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rsph6aQ8CDR2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.32■□□□□ 0.84
Rsph6aQ8CDR2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rsph6aQ8CDR2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rsph6aQ8CDR2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Gm25925-201ENSMUST00000158314 306 ntBASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rsph6aQ8CDR2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Chchd1-203ENSMUST00000224633 557 ntBASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rsph6aQ8CDR2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rsph6aQ8CDR2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rsph6aQ8CDR2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rsph6aQ8CDR2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms