Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf31Q8CCF0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Gm11764-201ENSMUST00000120221 623 ntBASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Prpf31Q8CCF0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf31Q8CCF0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Gm37153-201ENSMUST00000193637 231 ntBASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf31Q8CCF0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Gm14140-201ENSMUST00000119999 995 ntBASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf31Q8CCF0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms