Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Gm5587-201ENSMUST00000206270 674 ntBASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smim4Q8C1Q6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smim4Q8C1Q6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim4Q8C1Q6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Gm45328-201ENSMUST00000210942 917 ntBASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim4Q8C1Q6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms