Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx17Q8BVL3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Gm5866-201ENSMUST00000177881 973 ntBASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx17Q8BVL3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Gm9385-201ENSMUST00000117563 472 ntBASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Gm6257-201ENSMUST00000163864 910 ntBASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Gm24158-201ENSMUST00000175263 71 ntBASIC17.29■□□□□ 0.36
Snx17Q8BVL3 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.29■□□□□ 0.36
Snx17Q8BVL3 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx17Q8BVL3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx17Q8BVL3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Gm12008-201ENSMUST00000117791 755 ntBASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.27■□□□□ 0.36
Snx17Q8BVL3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms