Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Gm44492-201ENSMUST00000197012 141 ntBASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Gm18246-201ENSMUST00000221023 728 ntBASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scfd1Q8BRF7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scfd1Q8BRF7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.8■□□□□ 0.44
Scfd1Q8BRF7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scfd1Q8BRF7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms