Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap4Q8BMK4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap4Q8BMK4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.83□□□□□ -0.03
Ckap4Q8BMK4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Gm6623-201ENSMUST00000173570 544 ntBASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ckap4Q8BMK4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
Ckap4Q8BMK4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms