Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Krr1Q8BGA5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.83□□□□□ -0.03
Krr1Q8BGA5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.83□□□□□ -0.03
Krr1Q8BGA5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.83□□□□□ -0.03
Krr1Q8BGA5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Krr1Q8BGA5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.83□□□□□ -0.03
Krr1Q8BGA5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Krr1Q8BGA5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Krr1Q8BGA5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Gm18032-201ENSMUST00000222541 538 ntBASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krr1Q8BGA5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Gm11355-201ENSMUST00000121120 306 ntBASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Gm9987-201ENSMUST00000069768 567 ntBASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krr1Q8BGA5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krr1Q8BGA5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms