Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm8097-201ENSMUST00000117903 829 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm5864-201ENSMUST00000202263 970 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm8655-201ENSMUST00000221159 852 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Dancr-204ENSMUST00000132389 2347 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Prob1-201ENSMUST00000097619 3021 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.41■□□□□ 0.06
Ubp1Q811S7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubp1Q811S7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Gm18622-201ENSMUST00000219361 595 ntBASIC15.4■□□□□ 0.06
Ubp1Q811S7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.4■□□□□ 0.06
Ubp1Q811S7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ubp1Q811S7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ubp1Q811S7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ubp1Q811S7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ubp1Q811S7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms