Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.33■□□□□ 0.04
Ccdc116Q80X53 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc116Q80X53 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc116Q80X53 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Gm27357-201ENSMUST00000183754 135 ntBASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Gm27867-201ENSMUST00000184778 125 ntBASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Grk6-207ENSMUST00000225925 2769 ntBASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc116Q80X53 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Gm15165-201ENSMUST00000118140 502 ntBASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms