Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Gm17271-201ENSMUST00000165535 355 ntBASIC17.08■□□□□ 0.32
Ush1gQ80T11 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Gm27646-201ENSMUST00000183989 110 ntBASIC17.08■□□□□ 0.32
Ush1gQ80T11 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.08■□□□□ 0.32
Ush1gQ80T11 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.08■□□□□ 0.32
Ush1gQ80T11 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ush1gQ80T11 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm8825-201ENSMUST00000182565 998 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm4518-201ENSMUST00000182638 718 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.07■□□□□ 0.32
Ush1gQ80T11 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1gQ80T11 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.06■□□□□ 0.32
Ush1gQ80T11 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1gQ80T11 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ush1gQ80T11 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1gQ80T11 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms