Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh8Q7TSK3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Gm15467-201ENSMUST00000120582 445 ntBASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh8Q7TSK3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Gm11779-201ENSMUST00000118541 368 ntBASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh8Q7TSK3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Gm14140-201ENSMUST00000119999 995 ntBASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh8Q7TSK3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh8Q7TSK3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh8Q7TSK3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms