Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Gm10819-201ENSMUST00000099988 561 ntBASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Sh3d21Q7TSG5 App-207ENSMUST00000227737 2827 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm8825-201ENSMUST00000182565 998 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm4518-201ENSMUST00000182638 718 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm28033-201ENSMUST00000184224 96 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3d21Q7TSG5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Gm7506-201ENSMUST00000207758 815 ntBASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3d21Q7TSG5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3d21Q7TSG5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms