Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Otub1Q7TQI3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Otub1Q7TQI3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Gm25016-201ENSMUST00000158399 131 ntBASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Otub1Q7TQI3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Otub1Q7TQI3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms