Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ShprhQ7TPQ3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Arhgef33-209ENSMUST00000225223 714 ntBASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 H2-Pa-201ENSMUST00000182803 626 ntBASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 CT010506.4-201ENSMUST00000225457 351 ntBASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ShprhQ7TPQ3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Gm13233-201ENSMUST00000118760 1443 ntBASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Gm13244-201ENSMUST00000118855 1446 ntBASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ShprhQ7TPQ3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ShprhQ7TPQ3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ShprhQ7TPQ3 Gm13453-201ENSMUST00000118708 357 ntBASIC21.89■■□□□ 1.1
ShprhQ7TPQ3 Gm11543-201ENSMUST00000120758 370 ntBASIC21.89■■□□□ 1.1
ShprhQ7TPQ3 Gm17837-201ENSMUST00000186435 985 ntBASIC21.89■■□□□ 1.1
ShprhQ7TPQ3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC21.89■■□□□ 1.1
ShprhQ7TPQ3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC21.89■■□□□ 1.09
ShprhQ7TPQ3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Gm25144-201ENSMUST00000179561 110 ntBASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Gm25352-201ENSMUST00000179815 110 ntBASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ShprhQ7TPQ3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Gm7775-201ENSMUST00000218871 853 ntBASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
ShprhQ7TPQ3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Gm14719-201ENSMUST00000121891 340 ntBASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ShprhQ7TPQ3 Gm42473-201ENSMUST00000201056 2291 ntBASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.85■■□□□ 1.09
ShprhQ7TPQ3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms