Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Sned1Q70E20 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sned1Q70E20 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sned1Q70E20 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.69■□□□□ 0.58
Sned1Q70E20 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Sned1Q70E20 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.69■□□□□ 0.58
Sned1Q70E20 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.69■□□□□ 0.58
Sned1Q70E20 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.69■□□□□ 0.58
Sned1Q70E20 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sned1Q70E20 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.69■□□□□ 0.58
Sned1Q70E20 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sned1Q70E20 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Sned1Q70E20 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sned1Q70E20 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.68■□□□□ 0.58
Sned1Q70E20 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sned1Q70E20 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sned1Q70E20 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.68■□□□□ 0.58
Sned1Q70E20 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.68■□□□□ 0.58
Sned1Q70E20 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.68■□□□□ 0.58
Sned1Q70E20 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.68■□□□□ 0.58
Sned1Q70E20 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sned1Q70E20 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sned1Q70E20 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sned1Q70E20 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sned1Q70E20 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.68■□□□□ 0.58
Sned1Q70E20 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sned1Q70E20 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Gm24543-201ENSMUST00000103867 82 ntBASIC18.67■□□□□ 0.58
Sned1Q70E20 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.67■□□□□ 0.58
Sned1Q70E20 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sned1Q70E20 Gm9719-201ENSMUST00000162765 543 ntBASIC18.67■□□□□ 0.58
Sned1Q70E20 Gm43703-201ENSMUST00000200523 763 ntBASIC18.67■□□□□ 0.58
Sned1Q70E20 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sned1Q70E20 Gm9899-201ENSMUST00000065519 555 ntBASIC18.67■□□□□ 0.58
Sned1Q70E20 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sned1Q70E20 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sned1Q70E20 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sned1Q70E20 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sned1Q70E20 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.67■□□□□ 0.58
Sned1Q70E20 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm11478-201ENSMUST00000117851 599 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm4875-201ENSMUST00000118257 786 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm8602-201ENSMUST00000184045 607 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm18062-201ENSMUST00000208020 547 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 Gm18055-201ENSMUST00000208254 547 ntBASIC18.66■□□□□ 0.58
Sned1Q70E20 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.66■□□□□ 0.58
Sned1Q70E20 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Sned1Q70E20 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Sned1Q70E20 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.65■□□□□ 0.58
Sned1Q70E20 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sned1Q70E20 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.65■□□□□ 0.58
Sned1Q70E20 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms