Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nup188Q6ZQH8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gm16026-204ENSMUST00000162652 683 ntBASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gm7730-201ENSMUST00000212486 454 ntBASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup188Q6ZQH8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Gm11543-201ENSMUST00000120758 370 ntBASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Gm9824-201ENSMUST00000178707 561 ntBASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup188Q6ZQH8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup188Q6ZQH8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup188Q6ZQH8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nup188Q6ZQH8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms