Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Gm6433-201ENSMUST00000118634 875 ntBASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd3Q6P9Z1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd3Q6P9Z1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms