Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Casc4Q6P2L7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Casc4Q6P2L7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Casc4Q6P2L7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Casc4Q6P2L7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.83■□□□□ 0.13
Casc4Q6P2L7 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.83■□□□□ 0.13
Casc4Q6P2L7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Casc4Q6P2L7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Gm12497-201ENSMUST00000138778 237 ntBASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Casc4Q6P2L7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Gm4459-201ENSMUST00000118750 468 ntBASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Casc4Q6P2L7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Gm27741-201ENSMUST00000185060 237 ntBASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Casc4Q6P2L7 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms