Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg2Q6NS82 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Gm6443-201ENSMUST00000203599 874 ntBASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Gm6376-201ENSMUST00000209407 580 ntBASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Gm6296-201ENSMUST00000222599 943 ntBASIC16.81■□□□□ 0.28
Retreg2Q6NS82 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg2Q6NS82 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Gm18733-201ENSMUST00000173950 856 ntBASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg2Q6NS82 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Gm25745-201ENSMUST00000174945 133 ntBASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Gm43514-201ENSMUST00000198852 424 ntBASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.79■□□□□ 0.28
Retreg2Q6NS82 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg2Q6NS82 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retreg2Q6NS82 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms