Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.52■□□□□ 0.39
Tpm4Q6IRU2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Gm44430-201ENSMUST00000203376 995 ntBASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm4Q6IRU2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm4Q6IRU2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm4Q6IRU2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm4Q6IRU2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms