Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.78□□□□□ -0.36
Col7a1Q63870 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col7a1Q63870 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col7a1Q63870 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Gm5187-201ENSMUST00000117317 991 ntBASIC12.78□□□□□ -0.36
Col7a1Q63870 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col7a1Q63870 Gm45784-201ENSMUST00000188360 142 ntBASIC12.78□□□□□ -0.36
Col7a1Q63870 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.78□□□□□ -0.36
Col7a1Q63870 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.78□□□□□ -0.36
Col7a1Q63870 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Gm3436-201ENSMUST00000179930 840 ntBASIC12.78□□□□□ -0.36
Col7a1Q63870 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col7a1Q63870 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.77□□□□□ -0.36
Col7a1Q63870 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Col7a1Q63870 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.77□□□□□ -0.36
Col7a1Q63870 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col7a1Q63870 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Col7a1Q63870 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.77□□□□□ -0.37
Col7a1Q63870 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.77□□□□□ -0.37
Col7a1Q63870 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col7a1Q63870 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col7a1Q63870 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Col7a1Q63870 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.76□□□□□ -0.37
Col7a1Q63870 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.76□□□□□ -0.37
Col7a1Q63870 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.76□□□□□ -0.37
Col7a1Q63870 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col7a1Q63870 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.76□□□□□ -0.37
Col7a1Q63870 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col7a1Q63870 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.76□□□□□ -0.37
Col7a1Q63870 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.76□□□□□ -0.37
Col7a1Q63870 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col7a1Q63870 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm24543-201ENSMUST00000103867 82 ntBASIC12.75□□□□□ -0.37
Col7a1Q63870 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.75□□□□□ -0.37
Col7a1Q63870 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col7a1Q63870 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms