Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.41■□□□□ 0.54
Ctr9Q62018 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctr9Q62018 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ctr9Q62018 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.4■□□□□ 0.54
Ctr9Q62018 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.4■□□□□ 0.54
Ctr9Q62018 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.4■□□□□ 0.54
Ctr9Q62018 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ctr9Q62018 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ctr9Q62018 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctr9Q62018 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ctr9Q62018 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctr9Q62018 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Gm11764-201ENSMUST00000120221 623 ntBASIC18.39■□□□□ 0.53
Ctr9Q62018 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.39■□□□□ 0.53
Ctr9Q62018 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.39■□□□□ 0.53
Ctr9Q62018 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctr9Q62018 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ctr9Q62018 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.39■□□□□ 0.53
Ctr9Q62018 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.39■□□□□ 0.53
Ctr9Q62018 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ctr9Q62018 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctr9Q62018 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ctr9Q62018 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Ctr9Q62018 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.38■□□□□ 0.53
Ctr9Q62018 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.38■□□□□ 0.53
Ctr9Q62018 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.38■□□□□ 0.53
Ctr9Q62018 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Ctr9Q62018 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.38■□□□□ 0.53
Ctr9Q62018 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.38■□□□□ 0.53
Ctr9Q62018 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctr9Q62018 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.37■□□□□ 0.53
Ctr9Q62018 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ctr9Q62018 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.37■□□□□ 0.53
Ctr9Q62018 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.37■□□□□ 0.53
Ctr9Q62018 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.37■□□□□ 0.53
Ctr9Q62018 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.37■□□□□ 0.53
Ctr9Q62018 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.37■□□□□ 0.53
Ctr9Q62018 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms