Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Mre11Q61216 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.77■□□□□ 0.6
Mre11Q61216 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mre11Q61216 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mre11Q61216 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mre11Q61216 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mre11Q61216 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mre11Q61216 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Mre11Q61216 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Mre11Q61216 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Mre11Q61216 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Mre11Q61216 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.76■□□□□ 0.59
Mre11Q61216 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Mre11Q61216 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.76■□□□□ 0.59
Mre11Q61216 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Mre11Q61216 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mre11Q61216 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.75■□□□□ 0.59
Mre11Q61216 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Mre11Q61216 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Mre11Q61216 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mre11Q61216 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.74■□□□□ 0.59
Mre11Q61216 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.74■□□□□ 0.59
Mre11Q61216 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Gm27011-201ENSMUST00000182352 972 ntBASIC18.74■□□□□ 0.59
Mre11Q61216 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.74■□□□□ 0.59
Mre11Q61216 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mre11Q61216 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Mre11Q61216 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mre11Q61216 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mre11Q61216 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Mre11Q61216 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.73■□□□□ 0.59
Mre11Q61216 Gm12527-201ENSMUST00000117967 564 ntBASIC18.73■□□□□ 0.59
Mre11Q61216 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.73■□□□□ 0.59
Mre11Q61216 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Mre11Q61216 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mre11Q61216 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Mre11Q61216 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mre11Q61216 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.72■□□□□ 0.59
Mre11Q61216 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms