Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.94■□□□□ 0.46
Scnn1aQ61180 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.94■□□□□ 0.46
Scnn1aQ61180 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scnn1aQ61180 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.93■□□□□ 0.46
Scnn1aQ61180 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.93■□□□□ 0.46
Scnn1aQ61180 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scnn1aQ61180 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Gm45747-201ENSMUST00000212203 999 ntBASIC17.92■□□□□ 0.46
Scnn1aQ61180 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.92■□□□□ 0.46
Scnn1aQ61180 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scnn1aQ61180 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.91■□□□□ 0.46
Scnn1aQ61180 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scnn1aQ61180 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.9■□□□□ 0.46
Scnn1aQ61180 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scnn1aQ61180 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms