Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a4Q5XF90 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a4Q5XF90 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a4Q5XF90 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Gm11780-201ENSMUST00000136880 516 ntBASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Gm6296-201ENSMUST00000222599 943 ntBASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp13a4Q5XF90 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atp13a4Q5XF90 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms