Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc42Q5SV66 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Gm45058-201ENSMUST00000205810 766 ntBASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc42Q5SV66 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc42Q5SV66 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc42Q5SV66 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Gm27011-201ENSMUST00000182352 972 ntBASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Gm37722-201ENSMUST00000193757 208 ntBASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc42Q5SV66 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Gm27389-201ENSMUST00000183622 195 ntBASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Gm18959-201ENSMUST00000208954 655 ntBASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc42Q5SV66 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.87■□□□□ 0.29
Ccdc42Q5SV66 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms