Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Gm13829-201ENSMUST00000119600 138 ntBASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Gm18624-201ENSMUST00000220966 658 ntBASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col27a1Q5QNQ9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col27a1Q5QNQ9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Gm3436-201ENSMUST00000179930 840 ntBASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col27a1Q5QNQ9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Rarb-207ENSMUST00000225921 2756 ntBASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.89□□□□□ -0.03
Col27a1Q5QNQ9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col27a1Q5QNQ9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms