Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Gm15427-201ENSMUST00000117288 531 ntBASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Gm6257-201ENSMUST00000163864 910 ntBASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf43Q5NCP0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Gm13616-201ENSMUST00000120600 222 ntBASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Gm5177-201ENSMUST00000183092 997 ntBASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Gm27301-201ENSMUST00000184012 127 ntBASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Gm45747-201ENSMUST00000212203 999 ntBASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rnf43Q5NCP0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf43Q5NCP0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms