Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Gm7367-201ENSMUST00000057611 492 ntBASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf20Q5DTM8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Gm4459-201ENSMUST00000118750 468 ntBASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf20Q5DTM8 Asic1-205ENSMUST00000228185 1818 ntBASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf20Q5DTM8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Gm7506-201ENSMUST00000207758 815 ntBASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf20Q5DTM8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms