Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Gm43575-201ENSMUST00000196420 516 ntBASIC18.59■□□□□ 0.57
SfswapQ3USH5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.59■□□□□ 0.57
SfswapQ3USH5 Gm7787-201ENSMUST00000216858 688 ntBASIC18.59■□□□□ 0.57
SfswapQ3USH5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SfswapQ3USH5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.58■□□□□ 0.57
SfswapQ3USH5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SfswapQ3USH5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Gm6736-201ENSMUST00000166583 948 ntBASIC18.58■□□□□ 0.56
SfswapQ3USH5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Mir3113-201ENSMUST00000175478 76 ntBASIC18.58■□□□□ 0.56
SfswapQ3USH5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.58■□□□□ 0.56
SfswapQ3USH5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.58■□□□□ 0.56
SfswapQ3USH5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.57■□□□□ 0.56
SfswapQ3USH5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SfswapQ3USH5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.56■□□□□ 0.56
SfswapQ3USH5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.56■□□□□ 0.56
SfswapQ3USH5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.56■□□□□ 0.56
SfswapQ3USH5 Gm18489-201ENSMUST00000172565 551 ntBASIC18.56■□□□□ 0.56
SfswapQ3USH5 Gm24513-201ENSMUST00000174964 138 ntBASIC18.56■□□□□ 0.56
SfswapQ3USH5 Gm27397-201ENSMUST00000184997 107 ntBASIC18.56■□□□□ 0.56
SfswapQ3USH5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms