Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Gm27741-201ENSMUST00000185060 237 ntBASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.36□□□□□ -0.11
Nhlrc4Q3UP44 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Gm28659-201ENSMUST00000188013 759 ntBASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc4Q3UP44 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc4Q3UP44 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc4Q3UP44 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc4Q3UP44 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nhlrc4Q3UP44 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms