Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Gm11745-201ENSMUST00000121669 448 ntBASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Gm20553-201ENSMUST00000204205 844 ntBASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upf3aQ3ULJ3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Upf3aQ3ULJ3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Upf3aQ3ULJ3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Gm14057-201ENSMUST00000120631 482 ntBASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf3aQ3ULJ3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Gm12008-201ENSMUST00000117791 755 ntBASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf3aQ3ULJ3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf3aQ3ULJ3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms