Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.29■□□□□ 0.68
Vars2Q3U2A8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.29■□□□□ 0.68
Vars2Q3U2A8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Gm27920-201ENSMUST00000183953 96 ntBASIC19.28■□□□□ 0.68
Vars2Q3U2A8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Asic1-205ENSMUST00000228185 1818 ntBASIC19.28■□□□□ 0.68
Vars2Q3U2A8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Gm9115-201ENSMUST00000120192 1348 ntBASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Gm14722-201ENSMUST00000118943 689 ntBASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Gm12091-201ENSMUST00000146791 830 ntBASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vars2Q3U2A8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vars2Q3U2A8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.27■□□□□ 0.67
Vars2Q3U2A8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vars2Q3U2A8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vars2Q3U2A8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vars2Q3U2A8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Gm14042-201ENSMUST00000120139 833 ntBASIC19.26■□□□□ 0.67
Vars2Q3U2A8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Gm6266-201ENSMUST00000203844 806 ntBASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vars2Q3U2A8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Gm15824-201ENSMUST00000119516 955 ntBASIC19.25■□□□□ 0.67
Vars2Q3U2A8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vars2Q3U2A8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vars2Q3U2A8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms