Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fndc4Q3TR08 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fndc4Q3TR08 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fndc4Q3TR08 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Gm11355-201ENSMUST00000121120 306 ntBASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Fndc4Q3TR08 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms