Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hspg2Q05793 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Hspg2Q05793 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hspg2Q05793 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.41□□□□□ -0.58
Hspg2Q05793 Gm9063-201ENSMUST00000223299 582 ntBASIC11.41□□□□□ -0.58
Hspg2Q05793 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Hspg2Q05793 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.41□□□□□ -0.58
Hspg2Q05793 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.41□□□□□ -0.58
Hspg2Q05793 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hspg2Q05793 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.41□□□□□ -0.58
Hspg2Q05793 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.41□□□□□ -0.58
Hspg2Q05793 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hspg2Q05793 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm6180-201ENSMUST00000065243 498 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm24694-201ENSMUST00000180054 110 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm27663-201ENSMUST00000184839 110 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm7787-201ENSMUST00000216858 688 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm10154-201ENSMUST00000084445 354 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm27989-201ENSMUST00000184721 107 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.4□□□□□ -0.58
Hspg2Q05793 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hspg2Q05793 App-207ENSMUST00000227737 2827 ntBASIC11.4□□□□□ -0.58
Hspg2Q05793 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Hspg2Q05793 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hspg2Q05793 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.39□□□□□ -0.59
Hspg2Q05793 Mir1938-201ENSMUST00000158746 100 ntBASIC11.39□□□□□ -0.59
Hspg2Q05793 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.39□□□□□ -0.59
Hspg2Q05793 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Gm16026-204ENSMUST00000162652 683 ntBASIC11.39□□□□□ -0.59
Hspg2Q05793 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.39□□□□□ -0.59
Hspg2Q05793 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hspg2Q05793 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hspg2Q05793 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hspg2Q05793 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.39□□□□□ -0.59
Hspg2Q05793 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.39□□□□□ -0.59
Hspg2Q05793 Gm15483-201ENSMUST00000120338 456 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms