Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.96■□□□□ 0.15
Thumpd3P97770 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Thumpd3P97770 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Thumpd3P97770 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Thumpd3P97770 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Thumpd3P97770 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.94■□□□□ 0.14
Thumpd3P97770 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm28033-201ENSMUST00000184224 96 ntBASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm17971-201ENSMUST00000190239 806 ntBASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm18669-201ENSMUST00000216049 778 ntBASIC15.94■□□□□ 0.14
Thumpd3P97770 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Thumpd3P97770 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.94■□□□□ 0.14
Thumpd3P97770 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Gm29707-201ENSMUST00000196325 491 ntBASIC15.93■□□□□ 0.14
Thumpd3P97770 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Thumpd3P97770 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Thumpd3P97770 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Thumpd3P97770 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.93■□□□□ 0.14
Thumpd3P97770 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.93■□□□□ 0.14
Thumpd3P97770 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Thumpd3P97770 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Thumpd3P97770 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Thumpd3P97770 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Thumpd3P97770 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Thumpd3P97770 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Thumpd3P97770 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Thumpd3P97770 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms