Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Mir1199-201ENSMUST00000117015 119 ntBASIC13.15□□□□□ -0.3
Npas1P97459 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.15□□□□□ -0.3
Npas1P97459 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.15□□□□□ -0.3
Npas1P97459 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.15□□□□□ -0.3
Npas1P97459 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Npas1P97459 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Npas1P97459 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.15□□□□□ -0.3
Npas1P97459 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Npas1P97459 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Npas1P97459 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Npas1P97459 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Npas1P97459 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Npas1P97459 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.15□□□□□ -0.31
Npas1P97459 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Npas1P97459 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Npas1P97459 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Npas1P97459 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Npas1P97459 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.14□□□□□ -0.31
Npas1P97459 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Npas1P97459 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.14□□□□□ -0.31
Npas1P97459 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.14□□□□□ -0.31
Npas1P97459 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.14□□□□□ -0.31
Npas1P97459 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Npas1P97459 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npas1P97459 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Npas1P97459 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Npas1P97459 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.13□□□□□ -0.31
Npas1P97459 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.13□□□□□ -0.31
Npas1P97459 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Npas1P97459 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Npas1P97459 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npas1P97459 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
Npas1P97459 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.12□□□□□ -0.31
Npas1P97459 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Npas1P97459 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.12□□□□□ -0.31
Npas1P97459 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Npas1P97459 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms