Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.56□□□□□ -0.72
PrkdcP97313 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.56□□□□□ -0.72
PrkdcP97313 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.56□□□□□ -0.72
PrkdcP97313 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.56□□□□□ -0.72
PrkdcP97313 Gm15236-201ENSMUST00000117309 379 ntBASIC10.56□□□□□ -0.72
PrkdcP97313 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.56□□□□□ -0.72
PrkdcP97313 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
PrkdcP97313 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.56□□□□□ -0.72
PrkdcP97313 Gm6244-201ENSMUST00000178732 841 ntBASIC10.56□□□□□ -0.72
PrkdcP97313 Gm9522-201ENSMUST00000182394 926 ntBASIC10.56□□□□□ -0.72
PrkdcP97313 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC10.56□□□□□ -0.72
PrkdcP97313 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.56□□□□□ -0.72
PrkdcP97313 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.56□□□□□ -0.72
PrkdcP97313 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
PrkdcP97313 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
PrkdcP97313 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Gm10499-201ENSMUST00000174094 934 ntBASIC10.56□□□□□ -0.72
PrkdcP97313 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PrkdcP97313 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
PrkdcP97313 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
PrkdcP97313 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.55□□□□□ -0.72
PrkdcP97313 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.55□□□□□ -0.72
PrkdcP97313 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Gm45774-201ENSMUST00000211992 2665 ntBASIC10.55□□□□□ -0.72
PrkdcP97313 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
PrkdcP97313 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
PrkdcP97313 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.55□□□□□ -0.72
PrkdcP97313 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
PrkdcP97313 Gm8318-201ENSMUST00000182954 872 ntBASIC10.55□□□□□ -0.72
PrkdcP97313 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.55□□□□□ -0.72
PrkdcP97313 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.55□□□□□ -0.72
PrkdcP97313 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.55□□□□□ -0.72
PrkdcP97313 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
PrkdcP97313 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.55□□□□□ -0.72
PrkdcP97313 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
PrkdcP97313 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.55□□□□□ -0.72
PrkdcP97313 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PrkdcP97313 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.54□□□□□ -0.72
PrkdcP97313 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.54□□□□□ -0.72
PrkdcP97313 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.54□□□□□ -0.72
PrkdcP97313 Gm11841-201ENSMUST00000117060 1963 ntBASIC10.54□□□□□ -0.72
PrkdcP97313 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
PrkdcP97313 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
PrkdcP97313 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms