Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.92■□□□□ 0.3
CiitaP79621 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.92■□□□□ 0.3
CiitaP79621 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CiitaP79621 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.92■□□□□ 0.3
CiitaP79621 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.92■□□□□ 0.3
CiitaP79621 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.92■□□□□ 0.3
CiitaP79621 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CiitaP79621 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Grk6-207ENSMUST00000225925 2769 ntBASIC16.91■□□□□ 0.3
CiitaP79621 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.91■□□□□ 0.3
CiitaP79621 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.91■□□□□ 0.3
CiitaP79621 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CiitaP79621 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CiitaP79621 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.9■□□□□ 0.3
CiitaP79621 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CiitaP79621 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CiitaP79621 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CiitaP79621 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CiitaP79621 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.9■□□□□ 0.3
CiitaP79621 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.9■□□□□ 0.3
CiitaP79621 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CiitaP79621 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CiitaP79621 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CiitaP79621 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CiitaP79621 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.89■□□□□ 0.29
CiitaP79621 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CiitaP79621 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Gm14494-201ENSMUST00000118786 435 ntBASIC16.89■□□□□ 0.29
CiitaP79621 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.89■□□□□ 0.29
CiitaP79621 Gm12260-201ENSMUST00000122447 411 ntBASIC16.89■□□□□ 0.29
CiitaP79621 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.89■□□□□ 0.29
CiitaP79621 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.89■□□□□ 0.29
CiitaP79621 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CiitaP79621 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CiitaP79621 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CiitaP79621 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms