Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rad50P70388 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rad50P70388 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rad50P70388 Gm25745-201ENSMUST00000174945 133 ntBASIC18.73■□□□□ 0.59
Rad50P70388 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rad50P70388 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rad50P70388 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rad50P70388 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rad50P70388 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.72■□□□□ 0.59
Rad50P70388 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Rad50P70388 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.72■□□□□ 0.59
Rad50P70388 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.72■□□□□ 0.59
Rad50P70388 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rad50P70388 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rad50P70388 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.72■□□□□ 0.59
Rad50P70388 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rad50P70388 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.71■□□□□ 0.59
Rad50P70388 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rad50P70388 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Rad50P70388 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Rad50P70388 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Rad50P70388 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.71■□□□□ 0.59
Rad50P70388 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.71■□□□□ 0.59
Rad50P70388 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Rad50P70388 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.71■□□□□ 0.59
Rad50P70388 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rad50P70388 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Rad50P70388 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rad50P70388 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rad50P70388 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rad50P70388 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm8825-201ENSMUST00000182565 998 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm4518-201ENSMUST00000182638 718 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.7■□□□□ 0.58
Rad50P70388 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.7■□□□□ 0.58
Rad50P70388 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.7■□□□□ 0.58
Rad50P70388 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.7■□□□□ 0.58
Rad50P70388 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.7■□□□□ 0.58
Rad50P70388 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rad50P70388 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rad50P70388 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rad50P70388 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.69■□□□□ 0.58
Rad50P70388 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rad50P70388 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rad50P70388 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms