Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm4875-201ENSMUST00000118257 786 ntBASIC25.35■■□□□ 1.65
Cux2P70298 Gm15653-201ENSMUST00000119247 907 ntBASIC25.35■■□□□ 1.65
Cux2P70298 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC25.35■■□□□ 1.65
Cux2P70298 Gm43703-201ENSMUST00000200523 763 ntBASIC25.35■■□□□ 1.65
Cux2P70298 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Gm8839-201ENSMUST00000121279 1645 ntBASIC25.34■■□□□ 1.65
Cux2P70298 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Cux2P70298 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC25.34■■□□□ 1.65
Cux2P70298 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Cux2P70298 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC25.34■■□□□ 1.65
Cux2P70298 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Gm45195-201ENSMUST00000205597 1008 ntBASIC25.34■■□□□ 1.65
Cux2P70298 Gm45668-201ENSMUST00000211271 493 ntBASIC25.34■■□□□ 1.65
Cux2P70298 Rassf8-202ENSMUST00000058538 1131 ntBASIC25.34■■□□□ 1.65
Cux2P70298 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Cux2P70298 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cux2P70298 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Cux2P70298 Gm9719-201ENSMUST00000162765 543 ntBASIC25.33■■□□□ 1.65
Cux2P70298 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Gm8597-201ENSMUST00000191525 1109 ntBASIC25.33■■□□□ 1.65
Cux2P70298 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC25.33■■□□□ 1.65
Cux2P70298 AC153962.4-201ENSMUST00000217878 242 ntBASIC25.33■■□□□ 1.65
Cux2P70298 Shd-206ENSMUST00000225145 998 ntBASIC25.33■■□□□ 1.65
Cux2P70298 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cux2P70298 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC25.32■■□□□ 1.64
Cux2P70298 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Gm38319-201ENSMUST00000194537 1266 ntBASIC25.32■■□□□ 1.64
Cux2P70298 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC25.32■■□□□ 1.64
Cux2P70298 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC25.32■■□□□ 1.64
Cux2P70298 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cux2P70298 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Gm12091-201ENSMUST00000146791 830 ntBASIC25.31■■□□□ 1.64
Cux2P70298 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Cux2P70298 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Gm5320-201ENSMUST00000207163 1519 ntBASIC25.31■■□□□ 1.64
Cux2P70298 Gm45774-201ENSMUST00000211992 2665 ntBASIC25.31■■□□□ 1.64
Cux2P70298 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cux2P70298 Gm9115-201ENSMUST00000120192 1348 ntBASIC25.3■■□□□ 1.64
Cux2P70298 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Cux2P70298 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC25.3■■□□□ 1.64
Cux2P70298 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC25.3■■□□□ 1.64
Cux2P70298 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cux2P70298 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC25.3■■□□□ 1.64
Cux2P70298 Gm42612-201ENSMUST00000197986 623 ntBASIC25.3■■□□□ 1.64
Cux2P70298 Gm43170-201ENSMUST00000199827 612 ntBASIC25.3■■□□□ 1.64
Cux2P70298 Gm6266-201ENSMUST00000203844 806 ntBASIC25.3■■□□□ 1.64
Cux2P70298 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cux2P70298 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cux2P70298 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC25.3■■□□□ 1.64
Cux2P70298 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Cux2P70298 Gm14026-201ENSMUST00000120625 1789 ntBASIC25.3■■□□□ 1.64
Cux2P70298 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cux2P70298 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC25.29■■□□□ 1.64
Cux2P70298 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cux2P70298 Ldb3-207ENSMUST00000227819 1499 ntBASIC25.29■■□□□ 1.64
Cux2P70298 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cux2P70298 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC25.29■■□□□ 1.64
Cux2P70298 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cux2P70298 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC25.29■■□□□ 1.64
Cux2P70298 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cux2P70298 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cux2P70298 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC25.29■■□□□ 1.64
Cux2P70298 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cux2P70298 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms