Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lsm6P62313 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Lsm6P62313 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.72□□□□□ -0.21
Lsm6P62313 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Gm12497-201ENSMUST00000138778 237 ntBASIC13.72□□□□□ -0.21
Lsm6P62313 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.72□□□□□ -0.21
Lsm6P62313 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.72□□□□□ -0.21
Lsm6P62313 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lsm6P62313 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.72□□□□□ -0.21
Lsm6P62313 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm6P62313 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.71□□□□□ -0.21
Lsm6P62313 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Lsm6P62313 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.71□□□□□ -0.21
Lsm6P62313 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lsm6P62313 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Lsm6P62313 Gm12895-201ENSMUST00000122214 226 ntBASIC13.71□□□□□ -0.21
Lsm6P62313 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.71□□□□□ -0.21
Lsm6P62313 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Lsm6P62313 Gm27867-201ENSMUST00000184778 125 ntBASIC13.71□□□□□ -0.21
Lsm6P62313 Gm17807-201ENSMUST00000186869 298 ntBASIC13.71□□□□□ -0.21
Lsm6P62313 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.71□□□□□ -0.21
Lsm6P62313 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm6P62313 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm6P62313 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.7□□□□□ -0.22
Lsm6P62313 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.7□□□□□ -0.22
Lsm6P62313 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.7□□□□□ -0.22
Lsm6P62313 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lsm6P62313 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm6P62313 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm6P62313 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm6P62313 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.69□□□□□ -0.22
Lsm6P62313 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.69□□□□□ -0.22
Lsm6P62313 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm6P62313 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm6P62313 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm6P62313 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms