Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.46■□□□□ 0.07
Pdx1P52946 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdx1P52946 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pdx1P52946 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pdx1P52946 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pdx1P52946 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pdx1P52946 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Pdx1P52946 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Pdx1P52946 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.45■□□□□ 0.06
Pdx1P52946 Gm13418-201ENSMUST00000119097 944 ntBASIC15.45■□□□□ 0.06
Pdx1P52946 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.45■□□□□ 0.06
Pdx1P52946 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Gm11780-201ENSMUST00000136880 516 ntBASIC15.45■□□□□ 0.06
Pdx1P52946 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.45■□□□□ 0.06
Pdx1P52946 Gm4535-201ENSMUST00000182274 558 ntBASIC15.45■□□□□ 0.06
Pdx1P52946 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.45■□□□□ 0.06
Pdx1P52946 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.45■□□□□ 0.06
Pdx1P52946 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pdx1P52946 Gm10355-201ENSMUST00000097146 517 ntBASIC15.45■□□□□ 0.06
Pdx1P52946 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdx1P52946 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.44■□□□□ 0.06
Pdx1P52946 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.44■□□□□ 0.06
Pdx1P52946 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pdx1P52946 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.44■□□□□ 0.06
Pdx1P52946 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.44■□□□□ 0.06
Pdx1P52946 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pdx1P52946 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pdx1P52946 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pdx1P52946 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.44■□□□□ 0.06
Pdx1P52946 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdx1P52946 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.44■□□□□ 0.06
Pdx1P52946 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pdx1P52946 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pdx1P52946 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Pdx1P52946 Gm11452-201ENSMUST00000122376 690 ntBASIC15.43■□□□□ 0.06
Pdx1P52946 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pdx1P52946 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.43■□□□□ 0.06
Pdx1P52946 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Pdx1P52946 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdx1P52946 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms