Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.3■□□□□ 0.52
LtbrP50284 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LtbrP50284 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.3■□□□□ 0.52
LtbrP50284 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.3■□□□□ 0.52
LtbrP50284 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.3■□□□□ 0.52
LtbrP50284 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.3■□□□□ 0.52
LtbrP50284 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.3■□□□□ 0.52
LtbrP50284 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.3■□□□□ 0.52
LtbrP50284 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LtbrP50284 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbrP50284 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LtbrP50284 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LtbrP50284 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.29■□□□□ 0.52
LtbrP50284 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.29■□□□□ 0.52
LtbrP50284 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.29■□□□□ 0.52
LtbrP50284 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.29■□□□□ 0.52
LtbrP50284 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.29■□□□□ 0.52
LtbrP50284 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.29■□□□□ 0.52
LtbrP50284 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
LtbrP50284 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LtbrP50284 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.29■□□□□ 0.52
LtbrP50284 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbrP50284 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LtbrP50284 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.28■□□□□ 0.52
LtbrP50284 Gm27622-201ENSMUST00000183779 60 ntBASIC18.28■□□□□ 0.52
LtbrP50284 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.28■□□□□ 0.52
LtbrP50284 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.28■□□□□ 0.52
LtbrP50284 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbrP50284 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.27■□□□□ 0.52
LtbrP50284 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
LtbrP50284 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LtbrP50284 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.27■□□□□ 0.52
LtbrP50284 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.27■□□□□ 0.52
LtbrP50284 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LtbrP50284 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm4518-201ENSMUST00000182638 718 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Gm27437-201ENSMUST00000183429 107 ntBASIC18.27■□□□□ 0.52
LtbrP50284 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms