Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rfx3P48381 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rfx3P48381 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx3P48381 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx3P48381 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rfx3P48381 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rfx3P48381 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.14□□□□□ -0.15
Rfx3P48381 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.14□□□□□ -0.15
Rfx3P48381 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfx3P48381 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx3P48381 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx3P48381 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.14□□□□□ -0.15
Rfx3P48381 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.14□□□□□ -0.15
Rfx3P48381 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx3P48381 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx3P48381 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.13□□□□□ -0.15
Rfx3P48381 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx3P48381 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx3P48381 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Rfx3P48381 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx3P48381 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx3P48381 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx3P48381 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx3P48381 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfx3P48381 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx3P48381 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx3P48381 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.12□□□□□ -0.15
Rfx3P48381 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rfx3P48381 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfx3P48381 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx3P48381 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.12□□□□□ -0.15
Rfx3P48381 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rfx3P48381 Gm6659-201ENSMUST00000174752 547 ntBASIC14.12□□□□□ -0.15
Rfx3P48381 Gm23634-201ENSMUST00000175071 91 ntBASIC14.12□□□□□ -0.15
Rfx3P48381 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.12□□□□□ -0.15
Rfx3P48381 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Gm45328-201ENSMUST00000210942 917 ntBASIC14.12□□□□□ -0.15
Rfx3P48381 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.12□□□□□ -0.15
Rfx3P48381 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx3P48381 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.12□□□□□ -0.15
Rfx3P48381 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms