Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HttP42859 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HttP42859 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.51■□□□□ 0.23
HttP42859 Gm6257-201ENSMUST00000163864 910 ntBASIC16.51■□□□□ 0.23
HttP42859 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HttP42859 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.51■□□□□ 0.23
HttP42859 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HttP42859 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HttP42859 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.51■□□□□ 0.23
HttP42859 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.51■□□□□ 0.23
HttP42859 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.51■□□□□ 0.23
HttP42859 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HttP42859 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HttP42859 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.5■□□□□ 0.23
HttP42859 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HttP42859 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.5■□□□□ 0.23
HttP42859 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.5■□□□□ 0.23
HttP42859 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.5■□□□□ 0.23
HttP42859 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Gm15198-201ENSMUST00000117283 177 ntBASIC16.5■□□□□ 0.23
HttP42859 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.5■□□□□ 0.23
HttP42859 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.5■□□□□ 0.23
HttP42859 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.5■□□□□ 0.23
HttP42859 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HttP42859 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HttP42859 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.49■□□□□ 0.23
HttP42859 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HttP42859 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HttP42859 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.49■□□□□ 0.23
HttP42859 Gm4875-201ENSMUST00000118257 786 ntBASIC16.49■□□□□ 0.23
HttP42859 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.49■□□□□ 0.23
HttP42859 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.49■□□□□ 0.23
HttP42859 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HttP42859 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HttP42859 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.49■□□□□ 0.23
HttP42859 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.49■□□□□ 0.23
HttP42859 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.49■□□□□ 0.23
HttP42859 Gm21854-201ENSMUST00000179901 471 ntBASIC16.49■□□□□ 0.23
HttP42859 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.49■□□□□ 0.23
HttP42859 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HttP42859 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.49■□□□□ 0.23
HttP42859 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HttP42859 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HttP42859 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.48■□□□□ 0.23
HttP42859 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HttP42859 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Gm13226-201ENSMUST00000117838 404 ntBASIC16.48■□□□□ 0.23
HttP42859 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.48■□□□□ 0.23
HttP42859 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.48■□□□□ 0.23
HttP42859 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Gm5035-201ENSMUST00000215581 927 ntBASIC16.48■□□□□ 0.23
HttP42859 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HttP42859 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HttP42859 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HttP42859 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms